CVT26_002882 protein (Gymnopilus dilepis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

CVT26_002882

Uncharacterized protein. (430 aa)

Predicted Functional Partners:

CVT26_011914

0.944

CVT26_005237

0.929

CVT26_014211

0.928

CVT26_005998

0.862

CVT26_007074

0.807

CVT26_003168

0.771

CVT26_010550

0.751

CVT26_015775

0.751

CVT26_002497

0.751

CVT26_007909

0.751

Your Current Organism:

Gymnopilus dilepis

NCBI taxonomy Id: 231916
Other names: Agaricus dilepis, G. dilepis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CVT26_002497	CVT26_002882	A0A409WAR4	A0A409WRA9	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.751
CVT26_002497	CVT26_003168	A0A409WAR4	A0A409Y509	Ubiquitin-like domain-containing protein.	E2_bind domain-containing protein.	0.664
CVT26_002497	CVT26_005237	A0A409WAR4	A0A409YVJ0	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.970
CVT26_002497	CVT26_005998	A0A409WAR4	A0A409Y1F5	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.870
CVT26_002497	CVT26_007074	A0A409WAR4	A0A409VNK7	Ubiquitin-like domain-containing protein.	MPN domain-containing protein.	0.940
CVT26_002497	CVT26_007909	A0A409WAR4	A0A409X8A8	Ubiquitin-like domain-containing protein.	SH3 domain-containing protein.	0.700
CVT26_002497	CVT26_010550	A0A409WAR4	A0A409VZ86	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.700
CVT26_002497	CVT26_011914	A0A409WAR4	A0A409WNE9	Ubiquitin-like domain-containing protein.	AN1-type domain-containing protein.	0.963
CVT26_002497	CVT26_014211	A0A409WAR4	A0A409VUA8	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.929
CVT26_002497	CVT26_015775	A0A409WAR4	A0A409W4H7	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.700
CVT26_002882	CVT26_002497	A0A409WRA9	A0A409WAR4	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.751
CVT26_002882	CVT26_003168	A0A409WRA9	A0A409Y509	Uncharacterized protein.	E2_bind domain-containing protein.	0.771
CVT26_002882	CVT26_005237	A0A409WRA9	A0A409YVJ0	Uncharacterized protein.	Uncharacterized protein.	0.929
CVT26_002882	CVT26_005998	A0A409WRA9	A0A409Y1F5	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.862
CVT26_002882	CVT26_007074	A0A409WRA9	A0A409VNK7	Uncharacterized protein.	MPN domain-containing protein.	0.807
CVT26_002882	CVT26_007909	A0A409WRA9	A0A409X8A8	Uncharacterized protein.	SH3 domain-containing protein.	0.751
CVT26_002882	CVT26_010550	A0A409WRA9	A0A409VZ86	Uncharacterized protein.	Uncharacterized protein.	0.751
CVT26_002882	CVT26_011914	A0A409WRA9	A0A409WNE9	Uncharacterized protein.	AN1-type domain-containing protein.	0.944
CVT26_002882	CVT26_014211	A0A409WRA9	A0A409VUA8	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.928
CVT26_002882	CVT26_015775	A0A409WRA9	A0A409W4H7	Uncharacterized protein.	Uncharacterized protein.	0.751