STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVT26_004867Uncharacterized protein. (178 aa)    
Predicted Functional Partners:
CVT26_010036
PUA domain-containing protein.
   
 
 0.900
CVT26_004968
Uncharacterized protein.
   
 
 0.865
CVT26_015564
Uncharacterized protein.
    
   0.766
CVT26_014677
TruB_N domain-containing protein.
   
 
 0.731
CVT26_014676
Uncharacterized protein.
   
 
 0.731
CVT26_003436
CS domain-containing protein.
   
 
 0.611
CVT26_014148
H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.
   
 
 0.606
CVT26_009803
Uncharacterized protein.
   
 
 0.584
CVT26_002026
RRM domain-containing protein.
   
 
 0.581
CVT26_001772
Uncharacterized protein.
   
  
 0.553
Your Current Organism:
Gymnopilus dilepis
NCBI taxonomy Id: 231916
Other names: Agaricus dilepis, G. dilepis
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