STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVT26_008544Uncharacterized protein. (121 aa)    
Predicted Functional Partners:
CVT26_014669
TRASH domain-containing protein.
   
 
 0.985
CVT26_000243
RRM domain-containing protein.
   
   0.984
CVT26_009931
PUA domain-containing protein.
   
 
 0.981
CVT26_000368
Protein MAK16; Belongs to the MAK16 family.
   
   0.979
CVT26_009286
Brix domain-containing protein.
   
 
 0.973
CVT26_012941
Uncharacterized protein.
   
   0.972
CVT26_004321
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.
   
 
 0.971
CVT26_007276
Brix domain-containing protein.
   
   0.968
CVT26_013305
Brix domain-containing protein.
   
 
 0.965
CVT26_006230
Uncharacterized protein.
   
   0.960
Your Current Organism:
Gymnopilus dilepis
NCBI taxonomy Id: 231916
Other names: Agaricus dilepis, G. dilepis
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