CVT26_008591 protein (Gymnopilus dilepis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

CVT26_008591

Uncharacterized protein. (582 aa)

Predicted Functional Partners:

CVT26_013064

0.852

CVT26_004665

0.825

CVT26_016114

0.785

CVT26_003556

0.784

CVT26_003806

0.709

CVT26_004403

0.702

CVT26_011485

0.702

CVT26_015012

0.702

CVT26_007999

0.702

CVT26_004294

0.700

Your Current Organism:

Gymnopilus dilepis

NCBI taxonomy Id: 231916
Other names: Agaricus dilepis, G. dilepis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CVT26_003556	CVT26_003806	A0A409VS26	A0A409YMA5	Uncharacterized protein.	Response regulatory domain-containing protein.	0.724
CVT26_003556	CVT26_004294	A0A409VS26	A0A409YVC5	Uncharacterized protein.	Uncharacterized protein.	0.612
CVT26_003556	CVT26_004403	A0A409VS26	A0A409WNB5	Uncharacterized protein.	Uncharacterized protein.	0.786
CVT26_003556	CVT26_004665	A0A409VS26	A0A409YJE6	Uncharacterized protein.	J domain-containing protein.	0.543
CVT26_003556	CVT26_007999	A0A409VS26	A0A409XCR6	Uncharacterized protein.	Uncharacterized protein.	0.757
CVT26_003556	CVT26_008591	A0A409VS26	A0A409XXV8	Uncharacterized protein.	Uncharacterized protein.	0.784
CVT26_003556	CVT26_011485	A0A409VS26	A0A409WNG0	Uncharacterized protein.	Uncharacterized protein.	0.774
CVT26_003556	CVT26_013064	A0A409VS26	A0A409Y4I9	Uncharacterized protein.	Uncharacterized protein.	0.793
CVT26_003556	CVT26_015012	A0A409VS26	A0A409X743	Uncharacterized protein.	Uncharacterized protein.	0.781
CVT26_003556	CVT26_016114	A0A409VS26	A0A409XYU6	Uncharacterized protein.	Uncharacterized protein.	0.926
CVT26_003806	CVT26_003556	A0A409YMA5	A0A409VS26	Response regulatory domain-containing protein.	Uncharacterized protein.	0.724
CVT26_003806	CVT26_004294	A0A409YMA5	A0A409YVC5	Response regulatory domain-containing protein.	Uncharacterized protein.	0.863
CVT26_003806	CVT26_004403	A0A409YMA5	A0A409WNB5	Response regulatory domain-containing protein.	Uncharacterized protein.	0.836
CVT26_003806	CVT26_004665	A0A409YMA5	A0A409YJE6	Response regulatory domain-containing protein.	J domain-containing protein.	0.844
CVT26_003806	CVT26_007999	A0A409YMA5	A0A409XCR6	Response regulatory domain-containing protein.	Uncharacterized protein.	0.836
CVT26_003806	CVT26_008591	A0A409YMA5	A0A409XXV8	Response regulatory domain-containing protein.	Uncharacterized protein.	0.709
CVT26_003806	CVT26_011485	A0A409YMA5	A0A409WNG0	Response regulatory domain-containing protein.	Uncharacterized protein.	0.836
CVT26_003806	CVT26_013064	A0A409YMA5	A0A409Y4I9	Response regulatory domain-containing protein.	Uncharacterized protein.	0.842
CVT26_003806	CVT26_015012	A0A409YMA5	A0A409X743	Response regulatory domain-containing protein.	Uncharacterized protein.	0.836
CVT26_003806	CVT26_016114	A0A409YMA5	A0A409XYU6	Response regulatory domain-containing protein.	Uncharacterized protein.	0.709