CVT26_005083 protein (Gymnopilus dilepis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

CVT26_005083

DUF775 domain-containing protein. (203 aa)

Predicted Functional Partners:

CVT26_013064

0.758

CVT26_013994

0.733

CVT26_008065

0.728

CVT26_010931

0.727

CVT26_003429

0.727

CVT26_015268

0.727

CVT26_015838

0.727

CVT26_014880

0.716

CVT26_007580

0.713

CVT26_006644

0.713

Your Current Organism:

Gymnopilus dilepis

NCBI taxonomy Id: 231916
Other names: Agaricus dilepis, G. dilepis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CVT26_003429	CVT26_005083	A0A409VQD3	A0A409Y0A7	Uncharacterized protein; Belongs to the heat shock protein 70 family.	DUF775 domain-containing protein.	0.727
CVT26_003429	CVT26_006644	A0A409VQD3	A0A409Y2Q2	Uncharacterized protein; Belongs to the heat shock protein 70 family.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.903
CVT26_003429	CVT26_007580	A0A409VQD3	A0A409WI94	Uncharacterized protein; Belongs to the heat shock protein 70 family.	Amidohydro-rel domain-containing protein.	0.902
CVT26_003429	CVT26_008065	A0A409VQD3	A0A409YJL9	Uncharacterized protein; Belongs to the heat shock protein 70 family.	J domain-containing protein.	0.854
CVT26_003429	CVT26_010931	A0A409VQD3	A0A409VJ05	Uncharacterized protein; Belongs to the heat shock protein 70 family.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.886
CVT26_003429	CVT26_013064	A0A409VQD3	A0A409Y4I9	Uncharacterized protein; Belongs to the heat shock protein 70 family.	Uncharacterized protein.	0.920
CVT26_003429	CVT26_014880	A0A409VQD3	A0A409XWR3	Uncharacterized protein; Belongs to the heat shock protein 70 family.	J domain-containing protein.	0.956
CVT26_003429	CVT26_015268	A0A409VQD3	A0A409W9T2	Uncharacterized protein; Belongs to the heat shock protein 70 family.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.865
CVT26_005083	CVT26_003429	A0A409Y0A7	A0A409VQD3	DUF775 domain-containing protein.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.727
CVT26_005083	CVT26_006644	A0A409Y0A7	A0A409Y2Q2	DUF775 domain-containing protein.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.713
CVT26_005083	CVT26_007580	A0A409Y0A7	A0A409WI94	DUF775 domain-containing protein.	Amidohydro-rel domain-containing protein.	0.713
CVT26_005083	CVT26_008065	A0A409Y0A7	A0A409YJL9	DUF775 domain-containing protein.	J domain-containing protein.	0.728
CVT26_005083	CVT26_010931	A0A409Y0A7	A0A409VJ05	DUF775 domain-containing protein.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.727
CVT26_005083	CVT26_013064	A0A409Y0A7	A0A409Y4I9	DUF775 domain-containing protein.	Uncharacterized protein.	0.758
CVT26_005083	CVT26_013994	A0A409Y0A7	A0A409VW66	DUF775 domain-containing protein.	Uncharacterized protein.	0.733
CVT26_005083	CVT26_014880	A0A409Y0A7	A0A409XWR3	DUF775 domain-containing protein.	J domain-containing protein.	0.716
CVT26_005083	CVT26_015268	A0A409Y0A7	A0A409W9T2	DUF775 domain-containing protein.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.727
CVT26_005083	CVT26_015838	A0A409Y0A7	A0A409WAG1	DUF775 domain-containing protein.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.727
CVT26_006644	CVT26_003429	A0A409Y2Q2	A0A409VQD3	Uncharacterized protein; Belongs to the heat shock protein 70 family.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.903
CVT26_006644	CVT26_005083	A0A409Y2Q2	A0A409Y0A7	Uncharacterized protein; Belongs to the heat shock protein 70 family.	DUF775 domain-containing protein.	0.713