CVT26_014394 protein (Gymnopilus dilepis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

CVT26_014394

SE domain-containing protein. (494 aa)

Predicted Functional Partners:

CVT26_009551

0.988

CVT26_009400

0.973

CVT26_005561

0.959

CVT26_000802

0.951

CVT26_005659

0.940

CVT26_009973

0.935

CVT26_003482

0.908

CVT26_010453

0.908

CVT26_006085

0.883

CVT26_012098

0.823

Your Current Organism:

Gymnopilus dilepis

NCBI taxonomy Id: 231916
Other names: Agaricus dilepis, G. dilepis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CVT26_000802	CVT26_003482	A0A409VHY2	A0A409W320	3Beta_HSD domain-containing protein.	Uncharacterized protein.	0.951
CVT26_000802	CVT26_005561	A0A409VHY2	A0A409XZN2	3Beta_HSD domain-containing protein.	Uncharacterized protein.	0.977
CVT26_000802	CVT26_005659	A0A409VHY2	A0A409XZU3	3Beta_HSD domain-containing protein.	Uncharacterized protein.	0.971
CVT26_000802	CVT26_006085	A0A409VHY2	A0A409VQ84	3Beta_HSD domain-containing protein.	3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.	0.632
CVT26_000802	CVT26_009400	A0A409VHY2	A0A409VKA5	3Beta_HSD domain-containing protein.	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.	0.975
CVT26_000802	CVT26_009551	A0A409VHY2	A0A409VK93	3Beta_HSD domain-containing protein.	Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.	0.997
CVT26_000802	CVT26_009973	A0A409VHY2	A0A409WUU8	3Beta_HSD domain-containing protein.	Uncharacterized protein.	0.967
CVT26_000802	CVT26_010453	A0A409VHY2	A0A409Y0K8	3Beta_HSD domain-containing protein.	Uncharacterized protein.	0.951
CVT26_000802	CVT26_012098	A0A409VHY2	A0A409YGR4	3Beta_HSD domain-containing protein.	3-hydroxy-3-methylglutaryl coenzyme A reductase.	0.557
CVT26_000802	CVT26_014394	A0A409VHY2	A0A409Y7K1	3Beta_HSD domain-containing protein.	SE domain-containing protein.	0.951
CVT26_003482	CVT26_000802	A0A409W320	A0A409VHY2	Uncharacterized protein.	3Beta_HSD domain-containing protein.	0.951
CVT26_003482	CVT26_005561	A0A409W320	A0A409XZN2	Uncharacterized protein.	Uncharacterized protein.	0.603
CVT26_003482	CVT26_005659	A0A409W320	A0A409XZU3	Uncharacterized protein.	Uncharacterized protein.	0.403
CVT26_003482	CVT26_006085	A0A409W320	A0A409VQ84	Uncharacterized protein.	3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.	0.844
CVT26_003482	CVT26_009400	A0A409W320	A0A409VKA5	Uncharacterized protein.	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.	0.904
CVT26_003482	CVT26_009551	A0A409W320	A0A409VK93	Uncharacterized protein.	Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.	0.961
CVT26_003482	CVT26_012098	A0A409W320	A0A409YGR4	Uncharacterized protein.	3-hydroxy-3-methylglutaryl coenzyme A reductase.	0.593
CVT26_003482	CVT26_014394	A0A409W320	A0A409Y7K1	Uncharacterized protein.	SE domain-containing protein.	0.908
CVT26_005561	CVT26_000802	A0A409XZN2	A0A409VHY2	Uncharacterized protein.	3Beta_HSD domain-containing protein.	0.977
CVT26_005561	CVT26_003482	A0A409XZN2	A0A409W320	Uncharacterized protein.	Uncharacterized protein.	0.603