STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVT26_012285Uncharacterized protein. (455 aa)    
Predicted Functional Partners:
CVT26_004461
WD_REPEATS_REGION domain-containing protein.
   
 
 0.886
CVT26_014140
Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family.
   
 
 0.856
CVT26_000543
RIX1 domain-containing protein.
   
 0.846
CVT26_001595
C2H2-type domain-containing protein.
   
 
 0.798
CVT26_004227
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
 
 0.797
CVT26_002131
Ipi1_N domain-containing protein.
    
 
 0.786
CVT26_013596
Peptidase_M24 domain-containing protein.
   
 
 0.742
CVT26_008044
WD_REPEATS_REGION domain-containing protein.
   
 0.742
CVT26_004321
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.
   
 
 0.727
CVT26_003326
CP-type G domain-containing protein.
   
 
 0.718
Your Current Organism:
Gymnopilus dilepis
NCBI taxonomy Id: 231916
Other names: Agaricus dilepis, G. dilepis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.