STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVT26_015403RBR-type E3 ubiquitin transferase. (481 aa)    
Predicted Functional Partners:
CVT26_004794
RBR-type E3 ubiquitin transferase.
     
0.656
CVT26_006923
Tr-type G domain-containing protein.
   
 
 0.628
CVT26_000229
AB hydrolase-1 domain-containing protein.
     
 0.567
CVT26_009909
RING-type domain-containing protein.
     
 0.567
CVT26_003168
E2_bind domain-containing protein.
   
 
  0.548
CVT26_008804
Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for cytoplasm to vacuole transport (Cvt) and autophagy. Activates ATG12 for its conjugation with ATG5 and ATG8 for its conjugation with phosphatidylethanolamine. Both systems are needed for the ATG8 association to Cvt vesicles and autophagosomes membranes. Autophagy is essential for maintenance of amino acid levels and protein synthesis under nitrogen starvation. Required for selective autophagic degradation of the nucleus (nucleophagy) as well as for mitophagy wh [...]
     
 0.537
CVT26_001429
eRF1_1 domain-containing protein.
    
 
 0.470
CVT26_000640
Uncharacterized protein.
     
 0.467
CVT26_013717
Uncharacterized protein.
     
 0.467
CVT26_000121
Uncharacterized protein.
   
 
  0.462
Your Current Organism:
Gymnopilus dilepis
NCBI taxonomy Id: 231916
Other names: Agaricus dilepis, G. dilepis
Server load: low (18%) [HD]