STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVT26_013171Uncharacterized protein. (811 aa)    
Predicted Functional Partners:
PAN3
PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent 5'-3' exo [...]
    
 0.954
CVT26_007566
USP domain-containing protein.
    
 0.948
CVT26_014918
LsmAD domain-containing protein.
   
 
 0.911
CVT26_002112
Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.
    
 0.909
CVT26_003972
Uncharacterized protein.
    
 0.909
CVT26_008053
Uncharacterized protein.
    
 0.909
CVT26_012737
Nuclear cap-binding protein subunit 2.
   
 0.898
CVT26_006923
Tr-type G domain-containing protein.
   
 0.895
CVT26_010422
Uncharacterized protein.
   
 0.891
CVT26_007622
Uncharacterized protein.
   
 0.891
Your Current Organism:
Gymnopilus dilepis
NCBI taxonomy Id: 231916
Other names: Agaricus dilepis, G. dilepis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.