STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVT26_004213Uncharacterized protein. (344 aa)    
Predicted Functional Partners:
CVT26_015497
Uncharacterized protein.
   
   0.794
CVT26_005001
Exonuclease domain-containing protein.
   
   0.754
CVT26_007411
Uncharacterized protein; Belongs to the glycosyl hydrolase 18 family.
   
 
 0.689
CVT26_005929
S4 RNA-binding domain-containing protein.
   
   0.666
CVT26_009471
20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family.
   
    0.635
CVT26_006507
Uncharacterized protein.
   
   0.539
CVT26_009714
Uncharacterized protein.
   
   0.539
CVT26_001231
Uncharacterized protein.
   
   0.539
CVT26_014008
Exonuclease domain-containing protein.
   
   0.514
CVT26_013106
RRM domain-containing protein.
    
 
 0.514
Your Current Organism:
Gymnopilus dilepis
NCBI taxonomy Id: 231916
Other names: Agaricus dilepis, G. dilepis
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