CVT26_002382 protein (Gymnopilus dilepis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

CVT26_002382

Helicase C-terminal domain-containing protein. (2213 aa)

Predicted Functional Partners:

CVT26_011607

0.796

CVT26_003394

0.779

CVT26_008532

0.771

CVT26_001298

0.762

CVT26_005715

0.739

CVT26_002072

0.736

CVT26_003024

0.715

CVT26_012074

0.699

CVT26_007597

0.695

CVT26_004517

0.689

Your Current Organism:

Gymnopilus dilepis

NCBI taxonomy Id: 231916
Other names: Agaricus dilepis, G. dilepis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CVT26_001298	CVT26_002382	A0A409Y200	A0A409YP69	Uncharacterized protein; Belongs to the actin family.	Helicase C-terminal domain-containing protein.	0.762
CVT26_001298	CVT26_003024	A0A409Y200	A0A409W2Q8	Uncharacterized protein; Belongs to the actin family.	YL1_C domain-containing protein.	0.997
CVT26_001298	CVT26_003394	A0A409Y200	A0A409Y5H3	Uncharacterized protein; Belongs to the actin family.	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.	0.997
CVT26_001298	CVT26_008532	A0A409Y200	A0A409XXL3	Uncharacterized protein; Belongs to the actin family.	Uncharacterized protein; Belongs to the actin family.	0.978
CVT26_002072	CVT26_002382	A0A409VBX6	A0A409YP69	Uncharacterized protein.	Helicase C-terminal domain-containing protein.	0.736
CVT26_002072	CVT26_007597	A0A409VBX6	A0A409VZQ9	Uncharacterized protein.	Uncharacterized protein.	0.685
CVT26_002072	CVT26_011607	A0A409VBX6	A0A409YQR0	Uncharacterized protein.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.406
CVT26_002382	CVT26_001298	A0A409YP69	A0A409Y200	Helicase C-terminal domain-containing protein.	Uncharacterized protein; Belongs to the actin family.	0.762
CVT26_002382	CVT26_002072	A0A409YP69	A0A409VBX6	Helicase C-terminal domain-containing protein.	Uncharacterized protein.	0.736
CVT26_002382	CVT26_003024	A0A409YP69	A0A409W2Q8	Helicase C-terminal domain-containing protein.	YL1_C domain-containing protein.	0.715
CVT26_002382	CVT26_003394	A0A409YP69	A0A409Y5H3	Helicase C-terminal domain-containing protein.	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.	0.779
CVT26_002382	CVT26_004517	A0A409YP69	A0A409WZ57	Helicase C-terminal domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.689
CVT26_002382	CVT26_005715	A0A409YP69	A0A409YSM4	Helicase C-terminal domain-containing protein.	RING-type domain-containing protein.	0.739
CVT26_002382	CVT26_007597	A0A409YP69	A0A409VZQ9	Helicase C-terminal domain-containing protein.	Uncharacterized protein.	0.695
CVT26_002382	CVT26_008532	A0A409YP69	A0A409XXL3	Helicase C-terminal domain-containing protein.	Uncharacterized protein; Belongs to the actin family.	0.771
CVT26_002382	CVT26_011607	A0A409YP69	A0A409YQR0	Helicase C-terminal domain-containing protein.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.796
CVT26_002382	CVT26_012074	A0A409YP69	A0A409WWW7	Helicase C-terminal domain-containing protein.	Serine/threonine-protein kinase.	0.699
CVT26_003024	CVT26_001298	A0A409W2Q8	A0A409Y200	YL1_C domain-containing protein.	Uncharacterized protein; Belongs to the actin family.	0.997
CVT26_003024	CVT26_002382	A0A409W2Q8	A0A409YP69	YL1_C domain-containing protein.	Helicase C-terminal domain-containing protein.	0.715
CVT26_003024	CVT26_003394	A0A409W2Q8	A0A409Y5H3	YL1_C domain-containing protein.	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.	0.994