STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIN89453.1Arabinogalactan endo-1,4-beta-galactosidase. (731 aa)    
Predicted Functional Partners:
SIN89467.1
Beta-galactosidase.
 
  
 0.822
SIN75204.1
Hypothetical protein.
  
     0.521
SIN89481.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
     0.510
SIO26942.1
Hypothetical protein.
  
     0.493
SIN86539.1
Uncharacterized membrane protein.
  
     0.457
SIN89328.1
Hypothetical protein.
  
     0.424
SIN89493.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
     0.421
SIN89777.1
Serine protease, subtilisin family.
  
     0.415
SIN89874.1
Serine protease, subtilisin family.
  
     0.401
Your Current Organism:
Agromyces cerinus
NCBI taxonomy Id: 232089
Other names: A. cerinus subsp. cerinus, Agromyces cerinus subsp. cerinus
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.