STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000712975_01753Unannotated protein. (381 aa)    
Predicted Functional Partners:
GCA_000712975_01746
Unannotated protein.
       0.512
GCA_000712975_01747
Unannotated protein.
       0.512
GCA_000712975_01748
Unannotated protein.
       0.512
GCA_000712975_01749
Unannotated protein.
       0.512
GCA_000712975_01750
Unannotated protein.
       0.512
GCA_000712975_01751
Unannotated protein.
       0.512
GCA_000712975_01752
Unannotated protein.
       0.512
GCA_000712975_02082
Unannotated protein.
    
   0.491
GCA_000712975_02105
Unannotated protein.
    
   0.491
Your Current Organism:
Halomonas alkaliantarctica
NCBI taxonomy Id: 232346
Other names: ATCC BAA-848, DSM 15686, H. alkaliantarctica, Halomonas alkaliantarctica Poli et al. 2011, Halomonas sp. AP-2003, strain CRSS
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.