STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CB0101_08460Unannotated protein. (430 aa)    
Predicted Functional Partners:
CB0101_08450
Unannotated protein.
 
 
 0.996
CB0101_08455
Unannotated protein.
 
  
 0.977
GCA_000179235_02648
Unannotated protein.
 
  
 0.953
CB0101_01785
Unannotated protein; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
  
 0.907
CB0101_13160
Unannotated protein.
 
  
 0.900
CB0101_06450
Unannotated protein.
  
  
 0.738
CB0101_15115
Unannotated protein; Belongs to the bacterial secretin family.
 
  
 0.708
CB0101_07270
Unannotated protein.
   
 
 0.698
CB0101_07280
Unannotated protein.
   
 
 0.698
CB0101_09090
Unannotated protein.
  
    0.648
Your Current Organism:
Synechococcus sp. CB0101
NCBI taxonomy Id: 232348
Other names: S. sp. CB0101
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.