Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CB0101_01965 | murQ | GCA_000179235_01457 | GCA_000179235_01493 | Unannotated protein. | Unannotated protein; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate. | 0.900 |
CB0101_02640 | CB0101_02645 | GCA_000179235_01495 | GCA_000179235_01494 | Unannotated protein. | Unannotated protein. | 0.756 |
CB0101_02640 | GCA_000179235_01496 | GCA_000179235_01495 | GCA_000179235_01496 | Unannotated protein. | Unannotated protein. | 0.985 |
CB0101_02640 | murQ | GCA_000179235_01495 | GCA_000179235_01493 | Unannotated protein. | Unannotated protein; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate. | 0.649 |
CB0101_02640 | pstC-2 | GCA_000179235_01495 | GCA_000179235_01497 | Unannotated protein. | Unannotated protein; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | 0.548 |
CB0101_02645 | CB0101_02640 | GCA_000179235_01494 | GCA_000179235_01495 | Unannotated protein. | Unannotated protein. | 0.756 |
CB0101_02645 | GCA_000179235_01496 | GCA_000179235_01494 | GCA_000179235_01496 | Unannotated protein. | Unannotated protein. | 0.793 |
CB0101_02645 | murQ | GCA_000179235_01494 | GCA_000179235_01493 | Unannotated protein. | Unannotated protein; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate. | 0.811 |
CB0101_02645 | pstC-2 | GCA_000179235_01494 | GCA_000179235_01497 | Unannotated protein. | Unannotated protein; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | 0.452 |
CB0101_09880 | CB0101_14840 | GCA_000179235_00348 | GCA_000179235_02426 | Unannotated protein. | Unannotated protein. | 0.953 |
CB0101_09880 | anmK | GCA_000179235_00348 | GCA_000179235_02484 | Unannotated protein. | Unannotated protein; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family. | 0.633 |
CB0101_09880 | murQ | GCA_000179235_00348 | GCA_000179235_01493 | Unannotated protein. | Unannotated protein; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate. | 0.810 |
CB0101_13285 | CB0101_14840 | GCA_000179235_02709 | GCA_000179235_02426 | Unannotated protein; Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N- acetylglucosamine-6-phosphate (GlcNAc-6-P). | Unannotated protein. | 0.956 |
CB0101_13285 | murQ | GCA_000179235_02709 | GCA_000179235_01493 | Unannotated protein; Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N- acetylglucosamine-6-phosphate (GlcNAc-6-P). | Unannotated protein; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate. | 0.922 |
CB0101_14840 | CB0101_09880 | GCA_000179235_02426 | GCA_000179235_00348 | Unannotated protein. | Unannotated protein. | 0.953 |
CB0101_14840 | CB0101_13285 | GCA_000179235_02426 | GCA_000179235_02709 | Unannotated protein. | Unannotated protein; Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N- acetylglucosamine-6-phosphate (GlcNAc-6-P). | 0.956 |
CB0101_14840 | murQ | GCA_000179235_02426 | GCA_000179235_01493 | Unannotated protein. | Unannotated protein; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate. | 0.982 |
GCA_000179235_00577 | anmK | GCA_000179235_00577 | GCA_000179235_02484 | Unannotated protein. | Unannotated protein; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family. | 0.479 |
GCA_000179235_00577 | murQ | GCA_000179235_00577 | GCA_000179235_01493 | Unannotated protein. | Unannotated protein; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate. | 0.474 |
GCA_000179235_01496 | CB0101_02640 | GCA_000179235_01496 | GCA_000179235_01495 | Unannotated protein. | Unannotated protein. | 0.985 |
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