STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CB0101_04980Unannotated protein. (223 aa)    
Predicted Functional Partners:
CB0101_04975
Unannotated protein.
       0.773
CB0101_06730
Unannotated protein.
 
   
 0.646
CB0101_13795
Unannotated protein.
  
     0.636
CB0101_03320
Unannotated protein.
 
   
 0.575
CB0101_04985
Unannotated protein.
       0.548
CB0101_05475
Unannotated protein.
  
     0.493
murC
Unannotated protein; Cell wall formation; Belongs to the MurCDEF family.
 
 
 
 0.432
CB0101_09865
Unannotated protein.
  
   
 0.418
ftsZ
Unannotated protein; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
 
   
 0.403
Your Current Organism:
Synechococcus sp. CB0101
NCBI taxonomy Id: 232348
Other names: S. sp. CB0101
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.