Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AIS51430.1 | galT | TKV_c02250 | TKV_c02240 | Hypothetical protein. | Galactose-1-phosphate uridylyltransferase GalT. | 0.694 |
AIS51430.1 | glgA1 | TKV_c02250 | TKV_c02260 | Hypothetical protein. | Capsular glucan synthase GlgA. | 0.990 |
AIS51430.1 | glgA2 | TKV_c02250 | TKV_c11060 | Hypothetical protein. | Glycogen synthase GlgA; Synthesizes alpha-1,4-glucan chains using ADP-glucose. | 0.537 |
AIS51430.1 | glgB | TKV_c02250 | TKV_c11030 | Hypothetical protein. | 1,4-alpha-glucan branching enzyme GlgB; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | 0.981 |
AIS51430.1 | malP | TKV_c02250 | TKV_c16770 | Hypothetical protein. | Maltodextrin phosphorylase MalP. | 0.586 |
AIS51430.1 | pulA | TKV_c02250 | TKV_c11020 | Hypothetical protein. | Pullulanase PulA; Belongs to the glycosyl hydrolase 13 family. | 0.629 |
algC | glgA1 | TKV_c07170 | TKV_c02260 | Phosphomannomutase/phosphoglucomutase AlgC. | Capsular glucan synthase GlgA. | 0.904 |
algC | glgB | TKV_c07170 | TKV_c11030 | Phosphomannomutase/phosphoglucomutase AlgC. | 1,4-alpha-glucan branching enzyme GlgB; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | 0.433 |
algC | glgC | TKV_c07170 | TKV_c11040 | Phosphomannomutase/phosphoglucomutase AlgC. | Glucose-1-phosphate adenylyltransferase GlgC; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. | 0.919 |
algC | glgD | TKV_c07170 | TKV_c11050 | Phosphomannomutase/phosphoglucomutase AlgC. | Glycogen biosynthesis protein GlgD. | 0.919 |
algC | gtaB | TKV_c07170 | TKV_c07180 | Phosphomannomutase/phosphoglucomutase AlgC. | UTP--glucose-1-phosphate uridylyltransferase GtaB. | 0.993 |
algC | malP | TKV_c07170 | TKV_c16770 | Phosphomannomutase/phosphoglucomutase AlgC. | Maltodextrin phosphorylase MalP. | 0.964 |
algC | pulA | TKV_c07170 | TKV_c11020 | Phosphomannomutase/phosphoglucomutase AlgC. | Pullulanase PulA; Belongs to the glycosyl hydrolase 13 family. | 0.909 |
galT | AIS51430.1 | TKV_c02240 | TKV_c02250 | Galactose-1-phosphate uridylyltransferase GalT. | Hypothetical protein. | 0.694 |
galT | glgA1 | TKV_c02240 | TKV_c02260 | Galactose-1-phosphate uridylyltransferase GalT. | Capsular glucan synthase GlgA. | 0.643 |
galT | gtaB | TKV_c02240 | TKV_c07180 | Galactose-1-phosphate uridylyltransferase GalT. | UTP--glucose-1-phosphate uridylyltransferase GtaB. | 0.911 |
glgA1 | AIS51430.1 | TKV_c02260 | TKV_c02250 | Capsular glucan synthase GlgA. | Hypothetical protein. | 0.990 |
glgA1 | algC | TKV_c02260 | TKV_c07170 | Capsular glucan synthase GlgA. | Phosphomannomutase/phosphoglucomutase AlgC. | 0.904 |
glgA1 | galT | TKV_c02260 | TKV_c02240 | Capsular glucan synthase GlgA. | Galactose-1-phosphate uridylyltransferase GalT. | 0.643 |
glgA1 | glgA2 | TKV_c02260 | TKV_c11060 | Capsular glucan synthase GlgA. | Glycogen synthase GlgA; Synthesizes alpha-1,4-glucan chains using ADP-glucose. | 0.904 |
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