Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AIS51547.1 | glpG | TKV_c03420 | TKV_c03490 | Band 7 family protein. | Putative membrane protein GlpG. | 0.404 |
cwlM | glpG | TKV_c21500 | TKV_c03490 | N-acetylmuramoyl-L-alanine amidase CwlM. | Putative membrane protein GlpG. | 0.439 |
cwlM | lytC | TKV_c21500 | TKV_c06040 | N-acetylmuramoyl-L-alanine amidase CwlM. | N-acetylmuramoyl-L-alanine amidase LytC. | 0.910 |
glpG | AIS51547.1 | TKV_c03490 | TKV_c03420 | Putative membrane protein GlpG. | Band 7 family protein. | 0.404 |
glpG | cwlM | TKV_c03490 | TKV_c21500 | Putative membrane protein GlpG. | N-acetylmuramoyl-L-alanine amidase CwlM. | 0.439 |
glpG | lytC | TKV_c03490 | TKV_c06040 | Putative membrane protein GlpG. | N-acetylmuramoyl-L-alanine amidase LytC. | 0.439 |
glpG | qmcA | TKV_c03490 | TKV_c10670 | Putative membrane protein GlpG. | Protein QmcA. | 0.404 |
lytC | cwlM | TKV_c06040 | TKV_c21500 | N-acetylmuramoyl-L-alanine amidase LytC. | N-acetylmuramoyl-L-alanine amidase CwlM. | 0.910 |
lytC | glpG | TKV_c06040 | TKV_c03490 | N-acetylmuramoyl-L-alanine amidase LytC. | Putative membrane protein GlpG. | 0.439 |
qmcA | glpG | TKV_c10670 | TKV_c03490 | Protein QmcA. | Putative membrane protein GlpG. | 0.404 |