Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AIS51660.1 | panB | TKV_c04580 | TKV_c04570 | Hypothetical protein. | 3-methyl-2-oxobutanoate hydroxymethyltransferase PanB; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family. | 0.901 |
AIS51660.1 | panC | TKV_c04580 | TKV_c04560 | Hypothetical protein. | Pantothenate synthetase PanC; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family. | 0.989 |
AIS51660.1 | panD | TKV_c04580 | TKV_c04550 | Hypothetical protein. | Aspartate 1-decarboxylase PanD; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine. | 0.847 |
AIS52455.1 | ansB | TKV_c12840 | TKV_c21990 | Aspartate aminotransferase. | Aspartate ammonia-lyase AnsB. | 0.906 |
AIS52455.1 | asnB | TKV_c12840 | TKV_c09380 | Aspartate aminotransferase. | Asparagine synthetase B; Glutamine-hydrolyzing. | 0.905 |
AIS52455.1 | asnO | TKV_c12840 | TKV_c04900 | Aspartate aminotransferase. | Asparagine synthetase [glutamine-hydrolyzing] 3. | 0.905 |
AIS52455.1 | nadB1 | TKV_c12840 | TKV_c15070 | Aspartate aminotransferase. | L-aspartate oxidase 1; Catalyzes the oxidation of L-aspartate to iminoaspartate. | 0.817 |
AIS52455.1 | panD | TKV_c12840 | TKV_c04550 | Aspartate aminotransferase. | Aspartate 1-decarboxylase PanD; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine. | 0.814 |
AIS52455.1 | purA | TKV_c12840 | TKV_c24210 | Aspartate aminotransferase. | Adenylosuccinate synthetase PurA; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.912 |
ansB | AIS52455.1 | TKV_c21990 | TKV_c12840 | Aspartate ammonia-lyase AnsB. | Aspartate aminotransferase. | 0.906 |
ansB | asnB | TKV_c21990 | TKV_c09380 | Aspartate ammonia-lyase AnsB. | Asparagine synthetase B; Glutamine-hydrolyzing. | 0.900 |
ansB | asnO | TKV_c21990 | TKV_c04900 | Aspartate ammonia-lyase AnsB. | Asparagine synthetase [glutamine-hydrolyzing] 3. | 0.900 |
ansB | nadB1 | TKV_c21990 | TKV_c15070 | Aspartate ammonia-lyase AnsB. | L-aspartate oxidase 1; Catalyzes the oxidation of L-aspartate to iminoaspartate. | 0.988 |
ansB | panD | TKV_c21990 | TKV_c04550 | Aspartate ammonia-lyase AnsB. | Aspartate 1-decarboxylase PanD; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine. | 0.817 |
ansB | purA | TKV_c21990 | TKV_c24210 | Aspartate ammonia-lyase AnsB. | Adenylosuccinate synthetase PurA; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.904 |
asnB | AIS52455.1 | TKV_c09380 | TKV_c12840 | Asparagine synthetase B; Glutamine-hydrolyzing. | Aspartate aminotransferase. | 0.905 |
asnB | ansB | TKV_c09380 | TKV_c21990 | Asparagine synthetase B; Glutamine-hydrolyzing. | Aspartate ammonia-lyase AnsB. | 0.900 |
asnB | asnO | TKV_c09380 | TKV_c04900 | Asparagine synthetase B; Glutamine-hydrolyzing. | Asparagine synthetase [glutamine-hydrolyzing] 3. | 0.924 |
asnB | nadB1 | TKV_c09380 | TKV_c15070 | Asparagine synthetase B; Glutamine-hydrolyzing. | L-aspartate oxidase 1; Catalyzes the oxidation of L-aspartate to iminoaspartate. | 0.900 |
asnB | panD | TKV_c09380 | TKV_c04550 | Asparagine synthetase B; Glutamine-hydrolyzing. | Aspartate 1-decarboxylase PanD; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine. | 0.800 |
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