STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dppC1Dipeptide transport system permease protein DppC. (305 aa)    
Predicted Functional Partners:
dppB
Dipeptide transport system permease protein DppB.
 
 0.999
oppD
Oligopeptide transport ATP-binding protein OppD; Belongs to the ABC transporter superfamily.
 
 0.999
appF1
Oligopeptide transport ATP-binding protein AppF; Belongs to the ABC transporter superfamily.
 
 0.999
AIS52199.1
Peptide ABC transporter ATP-binding protein y4tR; Belongs to the ABC transporter superfamily.
 
 0.998
oppA2
Oligopeptide-binding protein OppA.
 
 0.991
dppE
Dipeptide-binding protein DppE.
 
 0.986
gsiA
Glutathione import ATP-binding protein GsiA; Belongs to the ABC transporter superfamily.
  
 0.985
oppA1
Oligopeptide-binding protein OppA.
 
 0.983
appF2
Oligopeptide transport ATP-binding protein AppF; Belongs to the ABC transporter superfamily.
 
 0.982
nikB
Nickel transport system permease protein NikB.
  
 0.929
Your Current Organism:
Thermoanaerobacter kivui
NCBI taxonomy Id: 2325
Other names: ATCC 33488, Acetogenium kivuense, Acetogenium kivui, DSM 2030, T. kivui, Thermoanaerobacter kivuense
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