STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIS52131.1AMP-dependent synthetase and ligase. (427 aa)    
Predicted Functional Partners:
srfAB
Surfactin synthase subunit 2; Belongs to the ATP-dependent AMP-binding enzyme family.
  
  
 0.943
AIS52133.1
Phosphoribosylglycinamide synthetase.
 
    0.839
AIS52134.1
Major facilitator superfamily MFS_1.
       0.773
tatD
Mg-dependent DNase TatD.
       0.773
AIS52129.1
Hypothetical protein.
     
 0.747
AIS52130.1
Hypothetical protein.
     
 0.747
lcfB1
long-chain-fatty-acid--CoA ligase LcfB.
     
 0.608
iorA
Indolepyruvate oxidoreductase subunit IorA; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.
 
    0.576
mutT3
NTP pyrophosphohydrolases including oxidative damage repair enzymes.
       0.562
sfp
4'-phosphopantetheinyl transferase Sfp; Belongs to the P-Pant transferase superfamily.
       0.562
Your Current Organism:
Thermoanaerobacter kivui
NCBI taxonomy Id: 2325
Other names: ATCC 33488, Acetogenium kivuense, Acetogenium kivui, DSM 2030, T. kivui, Thermoanaerobacter kivuense
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