STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIS52215.1NADH:flavin oxidoreductase, Old yellow enzyme family. (133 aa)    
Predicted Functional Partners:
AIS52216.1
NADH:flavin oxidoreductase, Old yellow enzyme family.
  
 0.994
trx
Thioredoxin Trx.
  
 0.858
AIS52217.1
Alpha/beta fold family hydrolase/acetyltransferase-like protein.
  
  
 0.857
AIS52880.1
Diguanylate cyclase and metal dependent phosphohydrolase.
  
 0.725
AIS53506.1
Glutaredoxin-like protein, YruB-family.
  
 
 0.720
nifJ2
Pyruvate-flavodoxin oxidoreductase NifJ; Belongs to the pyruvate:ferredoxin/flavodoxin oxidoreductase family.
  
  
 0.669
prs
Ribose-phosphate pyrophosphokinase Prs; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.
   
 0.640
ribBA
Riboflavin biosynthesis protein RibBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
  
  
 0.629
nifJ1
Pyruvate-flavodoxin oxidoreductase NifJ; Belongs to the pyruvate:ferredoxin/flavodoxin oxidoreductase family.
  
  
 0.608
lysR2
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
  
 0.590
Your Current Organism:
Thermoanaerobacter kivui
NCBI taxonomy Id: 2325
Other names: ATCC 33488, Acetogenium kivuense, Acetogenium kivui, DSM 2030, T. kivui, Thermoanaerobacter kivuense
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.