Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AIS52506.1 | AIS52880.1 | TKV_c13350 | TKV_c17280 | Chemotaxis signal transduction protein. | Diguanylate cyclase and metal dependent phosphohydrolase. | 0.957 |
AIS52506.1 | cheA | TKV_c13350 | TKV_c13360 | Chemotaxis signal transduction protein. | Chemotaxis protein CheA. | 0.999 |
AIS52506.1 | cheB | TKV_c13350 | TKV_c13370 | Chemotaxis signal transduction protein. | Chemotaxis response regulator protein-glutamate methylesterase CheB. | 0.999 |
AIS52506.1 | cheC | TKV_c13350 | TKV_c13340 | Chemotaxis signal transduction protein. | CheY-P phosphatase CheC. | 0.966 |
AIS52506.1 | cheD | TKV_c13350 | TKV_c13330 | Chemotaxis signal transduction protein. | Chemoreceptor glutamine deamidase CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family. | 0.985 |
AIS52506.1 | cheR | TKV_c13350 | TKV_c12720 | Chemotaxis signal transduction protein. | Chemotaxis protein methyltransferase CheR. | 0.974 |
AIS52506.1 | cheW | TKV_c13350 | TKV_c11260 | Chemotaxis signal transduction protein. | Chemotaxis protein CheW. | 0.917 |
AIS52506.1 | mcpB | TKV_c13350 | TKV_c04380 | Chemotaxis signal transduction protein. | Methyl-accepting chemotaxis protein McpB. | 0.988 |
AIS52506.1 | mcpC | TKV_c13350 | TKV_c24230 | Chemotaxis signal transduction protein. | Methyl-accepting chemotaxis protein McpC. | 0.988 |
AIS52506.1 | tlpB | TKV_c13350 | TKV_c04960 | Chemotaxis signal transduction protein. | Methyl-accepting chemotaxis protein TlpB. | 0.988 |
AIS52880.1 | AIS52506.1 | TKV_c17280 | TKV_c13350 | Diguanylate cyclase and metal dependent phosphohydrolase. | Chemotaxis signal transduction protein. | 0.957 |
AIS52880.1 | cheA | TKV_c17280 | TKV_c13360 | Diguanylate cyclase and metal dependent phosphohydrolase. | Chemotaxis protein CheA. | 0.974 |
AIS52880.1 | cheB | TKV_c17280 | TKV_c13370 | Diguanylate cyclase and metal dependent phosphohydrolase. | Chemotaxis response regulator protein-glutamate methylesterase CheB. | 0.958 |
AIS52880.1 | cheC | TKV_c17280 | TKV_c13340 | Diguanylate cyclase and metal dependent phosphohydrolase. | CheY-P phosphatase CheC. | 0.820 |
AIS52880.1 | cheD | TKV_c17280 | TKV_c13330 | Diguanylate cyclase and metal dependent phosphohydrolase. | Chemoreceptor glutamine deamidase CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family. | 0.556 |
AIS52880.1 | cheR | TKV_c17280 | TKV_c12720 | Diguanylate cyclase and metal dependent phosphohydrolase. | Chemotaxis protein methyltransferase CheR. | 0.947 |
AIS52880.1 | cheW | TKV_c17280 | TKV_c11260 | Diguanylate cyclase and metal dependent phosphohydrolase. | Chemotaxis protein CheW. | 0.958 |
AIS52880.1 | mcpB | TKV_c17280 | TKV_c04380 | Diguanylate cyclase and metal dependent phosphohydrolase. | Methyl-accepting chemotaxis protein McpB. | 0.924 |
AIS52880.1 | mcpC | TKV_c17280 | TKV_c24230 | Diguanylate cyclase and metal dependent phosphohydrolase. | Methyl-accepting chemotaxis protein McpC. | 0.928 |
AIS52880.1 | tlpB | TKV_c17280 | TKV_c04960 | Diguanylate cyclase and metal dependent phosphohydrolase. | Methyl-accepting chemotaxis protein TlpB. | 0.922 |
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