STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
spoIIIAHStage III sporulation protein AH. (181 aa)    
Predicted Functional Partners:
spoIIIAG
Stage III sporulation protein AG.
 
  
 0.999
spoIIIAA
Stage III sporulation protein AA.
 
  
 0.989
spoIIIAE
Stage III sporulation protein AE.
 
  
 0.962
spoIIIAC
Stage III sporulation protein AC.
 
  
 0.955
spoIIIAD
Stage III sporulation protein AD.
 
  
 0.933
spoIIIAF
Stage III sporulation protein AF.
 
  
 0.931
spoIIID
Stage III sporulation protein D.
  
  
 0.902
spoIIIAB
Stage III sporulation protein AB.
 
  
 0.878
spoIIP
Stage II sporulation protein P.
  
   
 0.863
AIS52160.1
Stage II sporulation protein P.
  
   
 0.834
Your Current Organism:
Thermoanaerobacter kivui
NCBI taxonomy Id: 2325
Other names: ATCC 33488, Acetogenium kivuense, Acetogenium kivui, DSM 2030, T. kivui, Thermoanaerobacter kivuense
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.