Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AIS51492.1 | AIS52813.1 | TKV_c02870 | TKV_c16590 | 2',3'-cyclic-nucleotide 2'-phosphodiesterase. | AAA ATPase. | 0.921 |
AIS51492.1 | pyrF1 | TKV_c02870 | TKV_c14410 | 2',3'-cyclic-nucleotide 2'-phosphodiesterase. | Orotidine 5'-phosphate decarboxylase PyrF; Belongs to the OMP decarboxylase family. Type 2 subfamily. | 0.912 |
AIS51492.1 | pyrF2 | TKV_c02870 | TKV_c24450 | 2',3'-cyclic-nucleotide 2'-phosphodiesterase. | Orotidine 5'-phosphate decarboxylase PyrF. | 0.912 |
AIS51492.1 | pyrH | TKV_c02870 | TKV_c13270 | 2',3'-cyclic-nucleotide 2'-phosphodiesterase. | Uridylate kinase PyrH; Catalyzes the reversible phosphorylation of UMP to UDP. | 0.901 |
AIS51492.1 | pyrR | TKV_c02870 | TKV_c14440 | 2',3'-cyclic-nucleotide 2'-phosphodiesterase. | Bifunctional protein PyrR; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant; Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily. | 0.901 |
AIS51492.1 | surE | TKV_c02870 | TKV_c12610 | 2',3'-cyclic-nucleotide 2'-phosphodiesterase. | 5'-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.908 |
AIS51492.1 | upp | TKV_c02870 | TKV_c01540 | 2',3'-cyclic-nucleotide 2'-phosphodiesterase. | Uracil phosphoribosyltransferase Upp; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.900 |
AIS52813.1 | AIS51492.1 | TKV_c16590 | TKV_c02870 | AAA ATPase. | 2',3'-cyclic-nucleotide 2'-phosphodiesterase. | 0.921 |
AIS52813.1 | pyrD | TKV_c16590 | TKV_c14390 | AAA ATPase. | Dihydroorotate dehydrogenase B (NAD(+)), catalytic subunit; Catalyzes the conversion of dihydroorotate to orotate. | 0.470 |
AIS52813.1 | pyrE | TKV_c16590 | TKV_c14380 | AAA ATPase. | Orotate phosphoribosyltransferase PyrE; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.540 |
AIS52813.1 | pyrF1 | TKV_c16590 | TKV_c14410 | AAA ATPase. | Orotidine 5'-phosphate decarboxylase PyrF; Belongs to the OMP decarboxylase family. Type 2 subfamily. | 0.916 |
AIS52813.1 | pyrF2 | TKV_c16590 | TKV_c24450 | AAA ATPase. | Orotidine 5'-phosphate decarboxylase PyrF. | 0.916 |
AIS52813.1 | pyrH | TKV_c16590 | TKV_c13270 | AAA ATPase. | Uridylate kinase PyrH; Catalyzes the reversible phosphorylation of UMP to UDP. | 0.951 |
AIS52813.1 | pyrR | TKV_c16590 | TKV_c14440 | AAA ATPase. | Bifunctional protein PyrR; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant; Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily. | 0.947 |
AIS52813.1 | surE | TKV_c16590 | TKV_c12610 | AAA ATPase. | 5'-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.910 |
AIS52813.1 | upp | TKV_c16590 | TKV_c01540 | AAA ATPase. | Uracil phosphoribosyltransferase Upp; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.987 |
pyrB | pyrD | TKV_c14430 | TKV_c14390 | Aspartate carbamoyltransferase PyrB; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | Dihydroorotate dehydrogenase B (NAD(+)), catalytic subunit; Catalyzes the conversion of dihydroorotate to orotate. | 0.988 |
pyrB | pyrE | TKV_c14430 | TKV_c14380 | Aspartate carbamoyltransferase PyrB; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | Orotate phosphoribosyltransferase PyrE; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.984 |
pyrB | pyrF1 | TKV_c14430 | TKV_c14410 | Aspartate carbamoyltransferase PyrB; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | Orotidine 5'-phosphate decarboxylase PyrF; Belongs to the OMP decarboxylase family. Type 2 subfamily. | 0.925 |
pyrB | pyrF2 | TKV_c14430 | TKV_c24450 | Aspartate carbamoyltransferase PyrB; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | Orotidine 5'-phosphate decarboxylase PyrF. | 0.823 |
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