Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AIS52738.1 | apeA | TKV_c15730 | TKV_c15720 | LuxR family two component transcriptional regulator. | M18 family aminopeptidase 1. | 0.490 |
AIS52738.1 | degS | TKV_c15730 | TKV_c15740 | LuxR family two component transcriptional regulator. | Signal transduction histidine-protein kinase/phosphatase DegS. | 0.993 |
apeA | AIS52738.1 | TKV_c15720 | TKV_c15730 | M18 family aminopeptidase 1. | LuxR family two component transcriptional regulator. | 0.490 |
apeA | coaE | TKV_c15720 | TKV_c08950 | M18 family aminopeptidase 1. | dephospho-CoA kinase CoaE; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. | 0.684 |
apeA | degS | TKV_c15720 | TKV_c15740 | M18 family aminopeptidase 1. | Signal transduction histidine-protein kinase/phosphatase DegS. | 0.489 |
coaE | apeA | TKV_c08950 | TKV_c15720 | dephospho-CoA kinase CoaE; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. | M18 family aminopeptidase 1. | 0.684 |
degS | AIS52738.1 | TKV_c15740 | TKV_c15730 | Signal transduction histidine-protein kinase/phosphatase DegS. | LuxR family two component transcriptional regulator. | 0.993 |
degS | apeA | TKV_c15740 | TKV_c15720 | Signal transduction histidine-protein kinase/phosphatase DegS. | M18 family aminopeptidase 1. | 0.489 |