STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIS52895.1ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component. (250 aa)    
Predicted Functional Partners:
AIS52896.1
ABC-type Fe3+-siderophore transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.981
AIS52897.1
ABC-type Fe3+-hydroxamate transport system, periplasmic component.
 
 
 0.949
AIS51725.1
ABC-type Fe3+-siderophore transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.913
AIS51515.1
ABC-type Fe3+-siderophore transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.911
AIS52199.1
Peptide ABC transporter ATP-binding protein y4tR; Belongs to the ABC transporter superfamily.
 
     
0.897
oppD
Oligopeptide transport ATP-binding protein OppD; Belongs to the ABC transporter superfamily.
 
     
0.883
AIS51720.1
ABC-type Fe3+-hydroxamate transport system, periplasmic component.
 
 
 0.880
AIS52213.1
Hypothetical protein.
 
 
 0.879
AIS52893.1
Formylmethanofuran dehydrogenase subunit E region.
 
    0.871
AIS51723.1
ABC-type Fe3+-hydroxamate transport system, periplasmic component.
 
 
 0.850
Your Current Organism:
Thermoanaerobacter kivui
NCBI taxonomy Id: 2325
Other names: ATCC 33488, Acetogenium kivuense, Acetogenium kivui, DSM 2030, T. kivui, Thermoanaerobacter kivuense
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