STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIS52932.1Hypothetical protein. (46 aa)    
Predicted Functional Partners:
AIS52933.1
Oxidoreductase domain-containing protein.
  
  
 0.861
AIS52934.1
Putative dehydrogenase.
  
  
 0.861
AIS52931.1
Xylose isomerase domain-containing protein.
  
    0.649
regA
HTH-type transcriptional regulator RegA.
  
    0.529
AIS51482.1
Sugar kinase, ribokinase family.
  
  
 0.521
AIS51391.1
Oxidoreductase domain-containing protein.
  
  
 0.413
mviM
Putative dehydrogenase MviM.
  
  
 0.413
AIS52129.1
Hypothetical protein.
  
  
 0.413
AIS52130.1
Hypothetical protein.
  
  
 0.413
Your Current Organism:
Thermoanaerobacter kivui
NCBI taxonomy Id: 2325
Other names: ATCC 33488, Acetogenium kivuense, Acetogenium kivui, DSM 2030, T. kivui, Thermoanaerobacter kivuense
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