STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIS52938.1Radical SAM domain-containing protein. (328 aa)    
Predicted Functional Partners:
AIS52939.1
Hypothetical protein.
     0.941
nifJ1
Pyruvate-flavodoxin oxidoreductase NifJ; Belongs to the pyruvate:ferredoxin/flavodoxin oxidoreductase family.
     
 0.639
nifJ2
Pyruvate-flavodoxin oxidoreductase NifJ; Belongs to the pyruvate:ferredoxin/flavodoxin oxidoreductase family.
     
 0.634
AIS52937.1
Hypothetical protein.
       0.488
AIS52602.1
2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family.
 
     0.434
AIS52940.1
Hypothetical protein.
       0.409
Your Current Organism:
Thermoanaerobacter kivui
NCBI taxonomy Id: 2325
Other names: ATCC 33488, Acetogenium kivuense, Acetogenium kivui, DSM 2030, T. kivui, Thermoanaerobacter kivuense
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.