STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIS52990.1LmbE family protein. (468 aa)    
Predicted Functional Partners:
AIS52487.1
Glycosyl transferase family 2.
   
 0.650
AIS51669.1
Spore germination protein-like gmad2.
  
     0.640
AIS52397.1
Hypothetical protein.
  
     0.602
mgsA
Methylglyoxal synthase MgsA; Catalyzes the formation of methylglyoxal from dihydroxyacetone phosphate.
  
  
 0.582
AIS52989.1
Dipeptidase/metallo peptidase.
  
    0.541
AIS51370.1
Cell surface receptor IPT/TIG domain-containing protein.
  
     0.538
AIS52755.1
Major facilitator superfamily MFS_1.
  
     0.527
AIS51316.1
Putative domain-containing HDIG; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
  
  
 0.517
AIS52414.1
tRNA nucleotidyltransferase/poly(A) polymerase; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
  
  
 0.517
AIS53004.1
Hypothetical protein.
  
     0.509
Your Current Organism:
Thermoanaerobacter kivui
NCBI taxonomy Id: 2325
Other names: ATCC 33488, Acetogenium kivuense, Acetogenium kivui, DSM 2030, T. kivui, Thermoanaerobacter kivuense
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