STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
iorAIndolepyruvate oxidoreductase subunit IorA; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates. (577 aa)    
Predicted Functional Partners:
iorB
Indolepyruvate oxidoreductase subunit IorB.
 
 
 0.985
nifJ1
Pyruvate-flavodoxin oxidoreductase NifJ; Belongs to the pyruvate:ferredoxin/flavodoxin oxidoreductase family.
  
 
 0.873
nifJ2
Pyruvate-flavodoxin oxidoreductase NifJ; Belongs to the pyruvate:ferredoxin/flavodoxin oxidoreductase family.
  
 
 0.873
ptb1
Phosphate butyryltransferase Ptb.
       0.694
moaC
Cyclic pyranopterin monophosphate synthase accessory protein MoaC; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.
   
    0.677
AIS51949.1
Glutamate synthase (NADPH/NADH) small chain.
 
  
 0.661
AIS53073.1
Pyruvate ferredoxin oxidoreductase subunit gamma.
 
 
 0.636
hydB
Electron bifurcating hydrogenase subunit HydB.
     
 0.619
hydA1
Electron bifurcating hydrogenase subunit HydA1.
     
 0.582
AIS52131.1
AMP-dependent synthetase and ligase.
 
    0.576
Your Current Organism:
Thermoanaerobacter kivui
NCBI taxonomy Id: 2325
Other names: ATCC 33488, Acetogenium kivuense, Acetogenium kivui, DSM 2030, T. kivui, Thermoanaerobacter kivuense
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