STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
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[Homology]
Score
iorAIndolepyruvate oxidoreductase subunit IorA; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates. (577 aa)    
Predicted Functional Partners:
iorB
Indolepyruvate oxidoreductase subunit IorB.
 
 
 0.982
nifJ2
Pyruvate-flavodoxin oxidoreductase NifJ; Belongs to the pyruvate:ferredoxin/flavodoxin oxidoreductase family.
  
 
 0.922
AIS51949.1
Glutamate synthase (NADPH/NADH) small chain.
  
 
 0.913
hydA1
Electron bifurcating hydrogenase subunit HydA1.
   
 
 0.903
hydC
Electron bifurcating hydrogenase subunit HydC.
   
 
 0.885
acsB
CO dehydrogenase/acetyl-CoA synthase complex, beta subunit.
    
   0.884
nfnB
Transhydrogenase subunit B.
  
 
 0.876
nifJ1
Pyruvate-flavodoxin oxidoreductase NifJ; Belongs to the pyruvate:ferredoxin/flavodoxin oxidoreductase family.
  
 
 0.848
fdhF
Hydrogen dependent carbon dioxide reductase subunit FdhF; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
   
 
 0.783
ptb1
Phosphate butyryltransferase Ptb.
     
 0.697
Your Current Organism:
Thermoanaerobacter kivui
NCBI taxonomy Id: 2325
Other names: ATCC 33488, Acetogenium kivuense, Acetogenium kivui, DSM 2030, T. kivui, Thermoanaerobacter kivuense
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