STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIS53077.1Hypothetical protein. (224 aa)    
Predicted Functional Partners:
AIS53076.1
Ferredoxin; Chain I.
 
     0.950
AIS53074.1
Pyruvate ferredoxin oxidoreductase subunit beta.
 
   
 0.940
AIS53075.1
Pyruvate ferredoxin oxidoreductase subunit alpha.
 
    0.938
AIS53073.1
Pyruvate ferredoxin oxidoreductase subunit gamma.
 
     0.933
buk1
Butyrate kinase 1; Belongs to the acetokinase family.
       0.762
spo0J
Stage 0 sporulation protein J; Belongs to the ParB family.
  
 
 0.668
noc
Nucleoid occlusion protein Noc; Belongs to the ParB family.
  
 
 0.668
AIS52234.1
Glycosyl transferase family 2.
  
 
 0.597
AIS52243.1
Glycosyltransferase.
  
 
 0.597
birA
Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
     
 0.579
Your Current Organism:
Thermoanaerobacter kivui
NCBI taxonomy Id: 2325
Other names: ATCC 33488, Acetogenium kivuense, Acetogenium kivui, DSM 2030, T. kivui, Thermoanaerobacter kivuense
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.