STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hydA1Electron bifurcating hydrogenase subunit HydA1. (571 aa)    
Predicted Functional Partners:
hydB
Electron bifurcating hydrogenase subunit HydB.
 
 
 0.999
hydC
Electron bifurcating hydrogenase subunit HydC.
 
 0.999
fdhF
Hydrogen dependent carbon dioxide reductase subunit FdhF; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
    
 0.919
nfnB
Transhydrogenase subunit B.
    
 0.895
AIS52218.1
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
   
 
 0.879
AIS53058.1
Ferredoxin.
   
 
 0.879
AIS51949.1
Glutamate synthase (NADPH/NADH) small chain.
    
 0.878
pylB
3-methylornithine synthase PylB.
 
  
 0.809
AIS53327.1
Small GTP-binding protein.
 
   
 0.783
hydA2
Hydrogen dependent carbon dioxide reductase subunit HydA2.
 
   
0.780
Your Current Organism:
Thermoanaerobacter kivui
NCBI taxonomy Id: 2325
Other names: ATCC 33488, Acetogenium kivuense, Acetogenium kivui, DSM 2030, T. kivui, Thermoanaerobacter kivuense
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.