STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
hydCElectron bifurcating hydrogenase subunit HydC. (170 aa)    
Predicted Functional Partners:
hydA1
Electron bifurcating hydrogenase subunit HydA1.
 
 0.999
hydB
Electron bifurcating hydrogenase subunit HydB.
 0.999
ech2D
Ech-type complex subunit Ech2D.
  
 0.995
ech2A1
Ech-type complex subunit Ech2A1.
  
 
 0.981
ech1D
Ech-type complex subunit Ech1D.
  
 0.958
ech2B
Ech-type complex subunit Ech2B.
     
  0.900
hydA2
Hydrogen dependent carbon dioxide reductase subunit HydA2.
 
 0.892
ech1F
Ech-type complex subunit Ech1F; Chain I.
  
 0.885
AIS52139.1
Hypothetical protein; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
  
 0.885
iorA
Indolepyruvate oxidoreductase subunit IorA; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.
   
 
 0.885
Your Current Organism:
Thermoanaerobacter kivui
NCBI taxonomy Id: 2325
Other names: ATCC 33488, Acetogenium kivuense, Acetogenium kivui, DSM 2030, T. kivui, Thermoanaerobacter kivuense
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.