STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ech2BEch-type complex subunit Ech2B. (311 aa)    
Predicted Functional Partners:
ech2C
Ech-type complex subunit Ech2C.
 
 
 0.991
ech2A2
Ech-type complex subunit Ech2A2; Chain M.
 
 
 0.987
ech2E
Ech-type complex subunit Ech2E.
 
 
 0.984
ech2D
Ech-type complex subunit Ech2D.
  
 0.983
ech2F
Ech-type complex subunit Ech2F.
 
 
 0.973
ech2A1
Ech-type complex subunit Ech2A1.
 
   
 0.962
ech1C
Ech-type complex subunit Ech1C.
 
 
 0.952
ech1E
Ech-type complex subunit Ech1E.
 
 
 0.937
ech1A
Ech-type complex subunit Ech1A.
 
 
 0.927
hydB
Electron bifurcating hydrogenase subunit HydB.
     
 0.911
Your Current Organism:
Thermoanaerobacter kivui
NCBI taxonomy Id: 2325
Other names: ATCC 33488, Acetogenium kivuense, Acetogenium kivui, DSM 2030, T. kivui, Thermoanaerobacter kivuense
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.