Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AIS53124.12Fe-2S ferredoxin. (645 aa)    
Predicted Functional Partners:
acsC
Corrinoid iron sulfur protein subunit alpha.
 
 
 0.963
acsD
Corrinoid iron sulfur protein subunit beta.
 
 
 
 0.944
acsB
CO dehydrogenase/acetyl-CoA synthase complex, beta subunit.
 
   
 0.877
cooC1
CO dehydrogenase nickel-insertion accessory protein CooC.
 
     0.798
metV
5,10-methylene-tetrahydrofolate reductase subunit MetV.
 
   
 0.787
cooC2
Carbon monoxide dehydrogenase accessory protein CooC.
 
   
 0.722
AIS53099.1
Hypothetical protein.
  
     0.699
AIS53122.1
Hypothetical protein.
 
     0.695
acsE
Methyltetrahydrofolate:corrinoid/iron-sulfur protein methyltransferase AcsE.
 
 
 
 0.689
AIS53123.1
Hypothetical protein.
       0.642
Your Current Organism:
Thermoanaerobacter kivui
NCBI taxonomy Id: 2325
Other names: ATCC 33488, Acetogenium kivuense, Acetogenium kivui, DSM 2030, T. kivui, Thermoanaerobacter kivuense
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