STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ajs_1331KEGG: dar:Daro_2619 hypothetical protein. (186 aa)    
Predicted Functional Partners:
Ajs_1330
KEGG: dar:Daro_2618 hypothetical protein.
 
     0.967
Ajs_1329
TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: dar:Daro_2617 heavy metal efflux pump CzcA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.958
Ajs_1332
PFAM: outer membrane efflux protein; KEGG: dar:Daro_2620 outer membrane efflux protein.
 
 
 0.948
Ajs_1328
KEGG: dar:Daro_2616 hypothetical protein.
 
     0.931
Ajs_1850
KEGG: dar:Daro_2616 hypothetical protein.
 
     0.796
Ajs_3946
PFAM: thiamineS protein; KEGG: rfr:Rfer_2848 thiamineS.
  
     0.657
Ajs_1326
PFAM: protein of unknown function UPF0060; KEGG: nmu:Nmul_A0351 hypothetical protein.
       0.648
Ajs_1327
Hypothetical protein.
       0.648
Ajs_2823
PFAM: protein of unknown function DUF214; KEGG: rfr:Rfer_3187 protein of unknown function DUF214.
  
 
 0.560
Ajs_4023
PFAM: acriflavin resistance protein; KEGG: dar:Daro_0459 acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.558
Your Current Organism:
Acidovorax sp. JS42
NCBI taxonomy Id: 232721
Other names: A. sp. JS42
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.