STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ajs_1414KEGG: xcv:XCV2383 hypothetical protein. (362 aa)    
Predicted Functional Partners:
Ajs_1415
PFAM: cytochrome c, class I; KEGG: xcv:XCV2384 putative cytochrome precursor.
  
    0.769
Ajs_0751
PFAM: VacJ family lipoprotein; KEGG: rfr:Rfer_2938 VacJ-like lipoprotein.
   
 
 0.544
Ajs_1412
KEGG: xcv:XCV2381 putative secreted protein.
       0.451
Ajs_1413
KEGG: xcv:XCV2382 putative secreted protein.
       0.451
Ajs_1409
KEGG: rme:Rmet_2335 putative secreted protein.
       0.446
Ajs_1407
KEGG: xcv:XCV2376 hypothetical protein.
       0.443
Ajs_1408
KEGG: bxe:Bxe_A1195 hypothetical protein.
       0.443
Ajs_1410
PFAM: Lytic transglycosylase, catalytic; KEGG: xcv:XCV2379 putative lytic transglycosylase precursor.
       0.443
Ajs_1411
KEGG: xcv:XCV2380 putative secreted protein.
       0.443
Your Current Organism:
Acidovorax sp. JS42
NCBI taxonomy Id: 232721
Other names: A. sp. JS42
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.