STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ajs_1611PFAM: alpha/beta hydrolase fold; KEGG: pol:Bpro_1863 alpha/beta hydrolase fold. (296 aa)    
Predicted Functional Partners:
aroQ
3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.
       0.780
Ajs_1612
PFAM: Class I peptide chain release factor; KEGG: pol:Bpro_1858 class I peptide chain release factor.
       0.771
Ajs_1614
PFAM: phospholipase/Carboxylesterase; KEGG: pol:Bpro_1861 phospholipase/carboxylesterase.
 
 0.617
Ajs_1609
KEGG: pol:Bpro_3349 hypothetical protein.
       0.548
Ajs_1613
PFAM: Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B; KEGG: pol:Bpro_1860 extradiol ring-cleavage dioxygenase, class III enzyme, subunit B.
  
  
 0.535
Ajs_1655
PFAM: alpha/beta hydrolase fold; KEGG: rfr:Rfer_3159 alpha/beta hydrolase.
  
   
 0.521
Ajs_0708
PFAM: alpha/beta hydrolase fold; KEGG: pol:Bpro_0770 alpha/beta hydrolase fold.
  
     0.516
Ajs_0069
PFAM: alpha/beta hydrolase fold; KEGG: bja:blr6083 putative hydrolase.
  
   
 0.503
Ajs_0062
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: reu:Reut_B3556 acyl-CoA dehydrogenase, C-terminal.
 
 0.474
Ajs_2324
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: ade:Adeh_0453 methyltransferase type 12.
 
   
 0.429
Your Current Organism:
Acidovorax sp. JS42
NCBI taxonomy Id: 232721
Other names: A. sp. JS42
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.