Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
Ajs_3208PFAM: protein of unknown function DUF498; KEGG: pol:Bpro_2188 protein of unknown function DUF498. (148 aa)    
Predicted Functional Partners:
Ajs_3539
KEGG: pol:Bpro_1243 biotin synthesis protein BioC.
  
     0.748
Ajs_3209
PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: pol:Bpro_2187 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen.
  
    0.701
Ajs_0497
PFAM: protein of unknown function DUF185; KEGG: pol:Bpro_4086 protein of unknown function DUF185.
  
     0.692
Ajs_3553
KEGG: pol:Bpro_1226 hypothetical protein.
  
     0.692
Ajs_3206
PFAM: homoserine dehydrogenase; amino acid-binding ACT domain protein; homoserine dehydrogenase, NAD-binding; KEGG: pol:Bpro_2190 homoserine dehydrogenase.
       0.611
Ajs_3205
KEGG: rfr:Rfer_1913 threonine synthase; TIGRFAM: threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit.
       0.603
Ajs_3207
PFAM: aminotransferase, class I and II; KEGG: rfr:Rfer_1911 aminotransferase, class I and II.
       0.579
Ajs_0183
KEGG: rfr:Rfer_0507 hypothetical protein.
  
     0.577
Ajs_3210
PFAM: PhoH family protein; SMART: Nucleotide binding protein, PINc; KEGG: pol:Bpro_2186 PhoH-like protein.
 
     0.569
Ajs_0963
NADH dehydrogenase subunit G; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family.
  
     0.495
Your Current Organism:
Acidovorax sp. JS42
NCBI taxonomy Id: 232721
Other names: A. sp. JS42
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