STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT65649.1Serine/threonine-protein kinase RsbW/sigma-B regulation protein RsbU (phosphoserine phosphatase). (137 aa)    
Predicted Functional Partners:
SIT65652.1
sigma-B regulation protein RsbU (phosphoserine phosphatase).
 0.999
SIT65650.1
Anti-sigma B factor antagonist; Belongs to the anti-sigma-factor antagonist family.
 
 0.996
SIT73266.1
Anti-sigma B factor antagonist/stage II sporulation protein AA (anti-sigma F factor antagonist); Belongs to the anti-sigma-factor antagonist family.
 
 0.991
SIT65651.1
NitT/TauT family transport system substrate-binding protein.
 
     0.763
SIT65891.1
His Kinase A (phospho-acceptor) domain-containing protein.
 
  
 0.745
SIT65619.1
Signal transduction histidine kinase.
  
  
 0.708
SIT65648.1
Cobaltochelatase CobN subunit.
       0.592
SIT65939.1
PAS domain S-box-containing protein.
 
  
 0.575
SIT72913.1
Xanthine/uracil permease.
  
     0.495
SIT65938.1
Serine protease Do.
    
 
 0.459
Your Current Organism:
Ectothiorhodosinus mongolicus
NCBI taxonomy Id: 233100
Other names: DSM 15479, E. mongolicus, Ectothiorhodosinus mongolicum, Ectothiorhodosinus mongolicus corrig. Gorlenko et al. 2007, UNIQEM U217, strain M9
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.