STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT65732.1Tat (twin-arginine translocation) pathway signal sequence; Part of the tripartite ATP-independent periplasmic (TRAP) transport system. (383 aa)    
Predicted Functional Partners:
SIT65731.1
TRAP transporter, DctM subunit.
 
 
  0.970
SIT70274.1
TRAP-type mannitol/chloroaromatic compound transport system, small permease component.
 
 
  0.881
SIT70270.1
TRAP transporter, DctM subunit.
 
 
  0.874
SIT65727.1
Hypothetical protein.
 
     0.810
SIT65728.1
Glycolate oxidase iron-sulfur subunit.
 
     0.787
SIT65729.1
Glycolate oxidase FAD binding subunit.
       0.757
SIT65730.1
Glycolate oxidase.
       0.757
SIT72015.1
TRAP transporter, 4TM/12TM fusion protein.
  
 
  0.736
SIT65733.1
Transcriptional regulator, IclR family.
 
     0.588
SIT70280.1
TRAP-type mannitol/chloroaromatic compound transport system, substrate-binding protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
  
  
 
0.529
Your Current Organism:
Ectothiorhodosinus mongolicus
NCBI taxonomy Id: 233100
Other names: DSM 15479, E. mongolicus, Ectothiorhodosinus mongolicum, Ectothiorhodosinus mongolicus corrig. Gorlenko et al. 2007, UNIQEM U217, strain M9
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