STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT65745.1SapC protein. (239 aa)    
Predicted Functional Partners:
SIT65741.1
Barrel-sandwich domain of CusB or HlyD membrane-fusion.
 
     0.858
SIT65742.1
Putative peptide zinc metalloprotease protein.
 
     0.847
SIT65744.1
RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
     0.776
secA
Protein translocase subunit secA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane.
       0.697
SIT65738.1
Hemolysin activation/secretion protein.
 
     0.695
SIT65739.1
Filamentous hemagglutinin family N-terminal domain-containing protein.
 
     0.661
SIT65737.1
VCBS repeat-containing protein.
 
    0.657
SIT65740.1
Protein of unknown function.
       0.649
SIT65736.1
Outer membrane protein.
 
     0.638
SIT68457.1
Putative transposase.
 
      0.570
Your Current Organism:
Ectothiorhodosinus mongolicus
NCBI taxonomy Id: 233100
Other names: DSM 15479, E. mongolicus, Ectothiorhodosinus mongolicum, Ectothiorhodosinus mongolicus corrig. Gorlenko et al. 2007, UNIQEM U217, strain M9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.