STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT65798.1ATP-binding cassette, subfamily C, CydC. (559 aa)    
Predicted Functional Partners:
SIT65797.1
ATP-binding cassette, subfamily C, CydD.
 
 
0.998
SIT65799.1
Cupin 2 domain-containing protein.
       0.773
SIT70512.1
Manganese/zinc/iron transport system ATP-binding protein.
 
      0.700
pstB
Phosphate ABC transporter ATP-binding protein, PhoT family; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
     
0.637
msbA
ATP-binding cassette, subfamily B, MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.
  
  
 
0.601
SIT65796.1
Membrane fusion protein, multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
   
   0.575
SIT65795.1
Multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
       0.538
SIT69437.1
ATP-binding cassette, subfamily B.
  
  
 
0.537
SIT69549.1
Protein of unknown function.
  
     0.511
SIT65676.1
Lipooligosaccharide transport system ATP-binding protein.
 
   
 
0.479
Your Current Organism:
Ectothiorhodosinus mongolicus
NCBI taxonomy Id: 233100
Other names: DSM 15479, E. mongolicus, Ectothiorhodosinus mongolicum, Ectothiorhodosinus mongolicus corrig. Gorlenko et al. 2007, UNIQEM U217, strain M9
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