Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIT65889.1 | SIT65890.1 | SAMN05216526_0345 | SAMN05216526_0346 | Hypothetical protein. | Cysteine synthase B; Belongs to the cysteine synthase/cystathionine beta- synthase family. | 0.835 |
SIT65889.1 | rlmD | SAMN05216526_0345 | SAMN05216526_0344 | Hypothetical protein. | 23S rRNA m(5)U-1939 methyltransferase; Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. RlmD subfamily. | 0.837 |
SIT65890.1 | SIT65889.1 | SAMN05216526_0346 | SAMN05216526_0345 | Cysteine synthase B; Belongs to the cysteine synthase/cystathionine beta- synthase family. | Hypothetical protein. | 0.835 |
SIT65890.1 | SIT68346.1 | SAMN05216526_0346 | SAMN05216526_0829 | Cysteine synthase B; Belongs to the cysteine synthase/cystathionine beta- synthase family. | Adenylylsulfate kinase. | 0.839 |
SIT65890.1 | SIT70477.1 | SAMN05216526_0346 | SAMN05216526_1323 | Cysteine synthase B; Belongs to the cysteine synthase/cystathionine beta- synthase family. | Molybdopterin synthase subunit MoaD. | 0.795 |
SIT65890.1 | SIT70642.1 | SAMN05216526_0346 | SAMN05216526_1364 | Cysteine synthase B; Belongs to the cysteine synthase/cystathionine beta- synthase family. | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.955 |
SIT65890.1 | SIT73306.1 | SAMN05216526_0346 | SAMN05216526_1853 | Cysteine synthase B; Belongs to the cysteine synthase/cystathionine beta- synthase family. | Serine O-acetyltransferase. | 0.995 |
SIT65890.1 | ahcY | SAMN05216526_0346 | SAMN05216526_1211 | Cysteine synthase B; Belongs to the cysteine synthase/cystathionine beta- synthase family. | Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. | 0.831 |
SIT65890.1 | cysS | SAMN05216526_0346 | SAMN05216526_1669 | Cysteine synthase B; Belongs to the cysteine synthase/cystathionine beta- synthase family. | cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.960 |
SIT65890.1 | metZ | SAMN05216526_0346 | SAMN05216526_1664 | Cysteine synthase B; Belongs to the cysteine synthase/cystathionine beta- synthase family. | O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide. | 0.985 |
SIT65890.1 | rlmD | SAMN05216526_0346 | SAMN05216526_0344 | Cysteine synthase B; Belongs to the cysteine synthase/cystathionine beta- synthase family. | 23S rRNA m(5)U-1939 methyltransferase; Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. RlmD subfamily. | 0.836 |
SIT65890.1 | serC | SAMN05216526_0346 | SAMN05216526_0029 | Cysteine synthase B; Belongs to the cysteine synthase/cystathionine beta- synthase family. | Phosphoserine aminotransferase apoenzyme; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily. | 0.799 |
SIT68346.1 | SIT65890.1 | SAMN05216526_0829 | SAMN05216526_0346 | Adenylylsulfate kinase. | Cysteine synthase B; Belongs to the cysteine synthase/cystathionine beta- synthase family. | 0.839 |
SIT68346.1 | SIT70642.1 | SAMN05216526_0829 | SAMN05216526_1364 | Adenylylsulfate kinase. | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.735 |
SIT68346.1 | SIT73306.1 | SAMN05216526_0829 | SAMN05216526_1853 | Adenylylsulfate kinase. | Serine O-acetyltransferase. | 0.512 |
SIT68346.1 | ahcY | SAMN05216526_0829 | SAMN05216526_1211 | Adenylylsulfate kinase. | Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. | 0.741 |
SIT68346.1 | cysS | SAMN05216526_0829 | SAMN05216526_1669 | Adenylylsulfate kinase. | cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.646 |
SIT68346.1 | metZ | SAMN05216526_0829 | SAMN05216526_1664 | Adenylylsulfate kinase. | O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide. | 0.600 |
SIT68346.1 | serC | SAMN05216526_0829 | SAMN05216526_0029 | Adenylylsulfate kinase. | Phosphoserine aminotransferase apoenzyme; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily. | 0.402 |
SIT70477.1 | SIT65890.1 | SAMN05216526_1323 | SAMN05216526_0346 | Molybdopterin synthase subunit MoaD. | Cysteine synthase B; Belongs to the cysteine synthase/cystathionine beta- synthase family. | 0.795 |
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