STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT68407.1Aminotransferase, LLPSF_NHT_00031 family; Belongs to the DegT/DnrJ/EryC1 family. (394 aa)    
Predicted Functional Partners:
SIT68392.1
GDP/UDP-N,N'-diacetylbacillosamine 2-epimerase (hydrolysing).
 
  
 0.958
SIT68409.1
dTDP-glucose 4,6-dehydratase.
 
  0.946
SIT68402.1
Sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family.
     0.942
SIT67057.1
NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC.
 
 0.915
SIT68397.1
N-acetylneuraminate synthase.
 
 
 0.899
SIT68389.1
CBS domain-containing protein.
 
    0.898
SIT68372.1
Predicted dehydrogenase.
 
 
 0.784
SIT68307.1
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
 
 0.763
SIT68415.1
ABC-type multidrug transport system, ATPase and permease component.
       0.727
SIT68384.1
N-acetyl sugar amidotransferase.
 
 
  0.707
Your Current Organism:
Ectothiorhodosinus mongolicus
NCBI taxonomy Id: 233100
Other names: DSM 15479, E. mongolicus, Ectothiorhodosinus mongolicum, Ectothiorhodosinus mongolicus corrig. Gorlenko et al. 2007, UNIQEM U217, strain M9
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