STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT68867.1Leader peptidase (prepilin peptidase) / N-methyltransferase; Belongs to the peptidase A24 family. (222 aa)    
Predicted Functional Partners:
SIT66728.1
Type IV pilus assembly protein PilB.
 
 
 0.906
SIT66732.1
Type II secretion system protein F (GspF).
 
  
 0.899
SIT66120.1
Competence protein ComEC.
  
  
 0.736
SIT69747.1
DNA protecting protein DprA.
  
  
 0.727
SIT68871.1
Hypothetical protein.
       0.678
SIT68874.1
Uncharacterized conserved protein YecT, DUF1311 family.
       0.678
SIT68734.1
Type IV pilus secretin (or competence protein) PilQ.
 
  
 0.668
SIT68738.1
Type IV pilus assembly protein PilA.
 
   
 0.653
SIT71134.1
Tetratricopeptide repeat-containing protein.
     
 0.528
coaE
dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.
  
    0.522
Your Current Organism:
Ectothiorhodosinus mongolicus
NCBI taxonomy Id: 233100
Other names: DSM 15479, E. mongolicus, Ectothiorhodosinus mongolicum, Ectothiorhodosinus mongolicus corrig. Gorlenko et al. 2007, UNIQEM U217, strain M9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.