Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIT69681.1 | SIT69682.1 | SAMN05216526_1137 | SAMN05216526_1138 | Hypothetical protein. | CBS domain-containing protein. | 0.701 |
SIT69681.1 | SIT69686.1 | SAMN05216526_1137 | SAMN05216526_1139 | Hypothetical protein. | Predicted deacylase. | 0.701 |
SIT69681.1 | SIT69692.1 | SAMN05216526_1137 | SAMN05216526_1140 | Hypothetical protein. | Protein of unknown function. | 0.807 |
SIT69681.1 | SIT69697.1 | SAMN05216526_1137 | SAMN05216526_1141 | Hypothetical protein. | Thioredoxin 1. | 0.637 |
SIT69681.1 | SIT69700.1 | SAMN05216526_1137 | SAMN05216526_1142 | Hypothetical protein. | Citrate/tricarballylate utilization protein. | 0.482 |
SIT69681.1 | SIT69706.1 | SAMN05216526_1137 | SAMN05216526_1143 | Hypothetical protein. | Tricarballylate dehydrogenase. | 0.482 |
SIT69681.1 | cobQ | SAMN05216526_1137 | SAMN05216526_1144 | Hypothetical protein. | Adenosylcobyric acid synthase (glutamine-hydrolysing); Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily. | 0.482 |
SIT69681.1 | cobQ-2 | SAMN05216526_1137 | SAMN05216526_1145 | Hypothetical protein. | Adenosylcobyric acid synthase (glutamine-hydrolysing); Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily. | 0.470 |
SIT69682.1 | SIT69681.1 | SAMN05216526_1138 | SAMN05216526_1137 | CBS domain-containing protein. | Hypothetical protein. | 0.701 |
SIT69682.1 | SIT69686.1 | SAMN05216526_1138 | SAMN05216526_1139 | CBS domain-containing protein. | Predicted deacylase. | 0.773 |
SIT69682.1 | SIT69692.1 | SAMN05216526_1138 | SAMN05216526_1140 | CBS domain-containing protein. | Protein of unknown function. | 0.773 |
SIT69682.1 | SIT69697.1 | SAMN05216526_1138 | SAMN05216526_1141 | CBS domain-containing protein. | Thioredoxin 1. | 0.701 |
SIT69682.1 | SIT69700.1 | SAMN05216526_1138 | SAMN05216526_1142 | CBS domain-containing protein. | Citrate/tricarballylate utilization protein. | 0.538 |
SIT69682.1 | SIT69706.1 | SAMN05216526_1138 | SAMN05216526_1143 | CBS domain-containing protein. | Tricarballylate dehydrogenase. | 0.526 |
SIT69682.1 | cobQ | SAMN05216526_1138 | SAMN05216526_1144 | CBS domain-containing protein. | Adenosylcobyric acid synthase (glutamine-hydrolysing); Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily. | 0.526 |
SIT69682.1 | cobQ-2 | SAMN05216526_1138 | SAMN05216526_1145 | CBS domain-containing protein. | Adenosylcobyric acid synthase (glutamine-hydrolysing); Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily. | 0.512 |
SIT69686.1 | SIT69681.1 | SAMN05216526_1139 | SAMN05216526_1137 | Predicted deacylase. | Hypothetical protein. | 0.701 |
SIT69686.1 | SIT69682.1 | SAMN05216526_1139 | SAMN05216526_1138 | Predicted deacylase. | CBS domain-containing protein. | 0.773 |
SIT69686.1 | SIT69692.1 | SAMN05216526_1139 | SAMN05216526_1140 | Predicted deacylase. | Protein of unknown function. | 0.773 |
SIT69686.1 | SIT69697.1 | SAMN05216526_1139 | SAMN05216526_1141 | Predicted deacylase. | Thioredoxin 1. | 0.701 |
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