Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIT70035.1 | SIT70045.1 | SAMN05216526_1218 | SAMN05216526_1220 | Rhodanese-like domain-containing protein. | Methyltransferase domain-containing protein. | 0.662 |
SIT70035.1 | SIT70048.1 | SAMN05216526_1218 | SAMN05216526_1221 | Rhodanese-like domain-containing protein. | TIGR00659 family protein. | 0.542 |
SIT70035.1 | SIT70053.1 | SAMN05216526_1218 | SAMN05216526_1222 | Rhodanese-like domain-containing protein. | Holin-like protein. | 0.540 |
SIT70035.1 | SIT70057.1 | SAMN05216526_1218 | SAMN05216526_1223 | Rhodanese-like domain-containing protein. | Putative NADH-flavin reductase. | 0.540 |
SIT70035.1 | trmL | SAMN05216526_1218 | SAMN05216526_1219 | Rhodanese-like domain-containing protein. | tRNA (cytidine/uridine-2'-O-)-methyltransferase; Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S-adenosyl-L-methionine to the 2'-OH of the wobble nucleotide. | 0.710 |
SIT70045.1 | SIT70035.1 | SAMN05216526_1220 | SAMN05216526_1218 | Methyltransferase domain-containing protein. | Rhodanese-like domain-containing protein. | 0.662 |
SIT70045.1 | SIT70048.1 | SAMN05216526_1220 | SAMN05216526_1221 | Methyltransferase domain-containing protein. | TIGR00659 family protein. | 0.625 |
SIT70045.1 | SIT70053.1 | SAMN05216526_1220 | SAMN05216526_1222 | Methyltransferase domain-containing protein. | Holin-like protein. | 0.625 |
SIT70045.1 | SIT70057.1 | SAMN05216526_1220 | SAMN05216526_1223 | Methyltransferase domain-containing protein. | Putative NADH-flavin reductase. | 0.695 |
SIT70045.1 | trmL | SAMN05216526_1220 | SAMN05216526_1219 | Methyltransferase domain-containing protein. | tRNA (cytidine/uridine-2'-O-)-methyltransferase; Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S-adenosyl-L-methionine to the 2'-OH of the wobble nucleotide. | 0.741 |
SIT70048.1 | SIT70035.1 | SAMN05216526_1221 | SAMN05216526_1218 | TIGR00659 family protein. | Rhodanese-like domain-containing protein. | 0.542 |
SIT70048.1 | SIT70045.1 | SAMN05216526_1221 | SAMN05216526_1220 | TIGR00659 family protein. | Methyltransferase domain-containing protein. | 0.625 |
SIT70048.1 | SIT70053.1 | SAMN05216526_1221 | SAMN05216526_1222 | TIGR00659 family protein. | Holin-like protein. | 0.993 |
SIT70048.1 | SIT70057.1 | SAMN05216526_1221 | SAMN05216526_1223 | TIGR00659 family protein. | Putative NADH-flavin reductase. | 0.773 |
SIT70048.1 | trmL | SAMN05216526_1221 | SAMN05216526_1219 | TIGR00659 family protein. | tRNA (cytidine/uridine-2'-O-)-methyltransferase; Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S-adenosyl-L-methionine to the 2'-OH of the wobble nucleotide. | 0.601 |
SIT70053.1 | SIT70035.1 | SAMN05216526_1222 | SAMN05216526_1218 | Holin-like protein. | Rhodanese-like domain-containing protein. | 0.540 |
SIT70053.1 | SIT70045.1 | SAMN05216526_1222 | SAMN05216526_1220 | Holin-like protein. | Methyltransferase domain-containing protein. | 0.625 |
SIT70053.1 | SIT70048.1 | SAMN05216526_1222 | SAMN05216526_1221 | Holin-like protein. | TIGR00659 family protein. | 0.993 |
SIT70053.1 | SIT70057.1 | SAMN05216526_1222 | SAMN05216526_1223 | Holin-like protein. | Putative NADH-flavin reductase. | 0.773 |
SIT70053.1 | trmL | SAMN05216526_1222 | SAMN05216526_1219 | Holin-like protein. | tRNA (cytidine/uridine-2'-O-)-methyltransferase; Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S-adenosyl-L-methionine to the 2'-OH of the wobble nucleotide. | 0.601 |
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