STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANB19979.1Hypothetical protein; Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety; Belongs to the PagL family. (193 aa)    
Predicted Functional Partners:
ANB20599.1
Deacylase; Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety; Belongs to the PagL family.
  
  
 
0.911
ANB20312.1
3-deoxy-D-manno-octulosonic acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family.
    
  0.900
ANB22343.1
Tetraacyldisaccharide 4'-kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.900
ANB20486.1
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.530
ANB23452.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.471
ANB23408.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.427
ANB19978.1
Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.427
ANB22348.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.420
ANB23346.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the skp family.
    
 
 0.406
ANB21352.1
Glutathione S-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.404
Your Current Organism:
Alteromonas stellipolaris
NCBI taxonomy Id: 233316
Other names: A. stellipolaris, Alteromonas stellaepolaris, Alteromonas stellipolaris Van Trappen et al. 2004, DSM 15691, LMG 21861, LMG:21861, strain ANT 69a
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